Details of Duplex


2D Structure dot-bracket from RNAduplex"
GGTCGTATGTGTGACGCCATTT&AAGTGGCAACGACTTGGACATCTGAGCTGTCACTGCCGAAAACAGGCCG
((((((..((((((((((((((&))))))).....................))))).)).....)).)))).
Details
MiRNAhsa-miR-489-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site55,104
Score0.923
Seed0
Au0.544
Energy-15.6
Binding len49
Me-7.795
Phylopstem0.5195021333333334
Phylopflank0.5032238099999999
Longest consecutive pairings7
Position of longest consecutive pairings42
Pairings in 3prime end8
Position5UTR
2D Structure