Details of Duplex


2D Structure dot-bracket from RNAduplex"
CCATGGATCTCCAGGTGGGT&ATCTGGAGTCCT
....(((.((((((((....&))))))))))).
Details
MiRNAhsa-miR-490-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1273,1285
Score0.923
Seed0
Au0.603
Energy-16.3
Binding len12
Me-11.86
Phylopstem3.021281
Phylopflank4.26431866375
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure