Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAACCTGGAGGACTCCATGCTG&AGTATGGAGACCTCCACTGGTC
..(((((((((.(((((((((.&))))))))).))))))..))).
Details
MiRNAhsa-miR-490-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1230,1252
Score0.923
Seed1
Au0.559
Energy-27.5
Binding len22
Me-8.304
Phylopstem4.519050222222223
Phylopflank3.844976625
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end7
PositionCDS
2D Structure