Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGAGGTATAGGGCATGGGAA&TCCCAAAACTGGAGTTTTCGAAGAGAAACATGCCAAACCTCC
.(((((....((((((....&.))))))..))))).
Details
MiRNAhsa-miR-202-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site717,759
Score0.923
Seed0
Au0.618
Energy-17.4
Binding len15
Me-9.95
Phylopstem3.868575666666666
Phylopflank4.723002492500001
Longest consecutive pairings6
Position of longest consecutive pairings8
Pairings in 3prime end4
PositionCDS
2D Structure