Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGAGGTATAGGGCATGGGAA&TCCCATGATAGATAACCCAAAATACAAAGGAGTATGGAGACCTCC
.(((((...((((((((((.&)))))))........))).....................))))).
Details
MiRNAhsa-miR-202-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1200,1245
Score0.846
Seed0
Au0.588
Energy-17.0
Binding len45
Me-8.707
Phylopstem4.071404111111111
Phylopflank3.6973467012499994
Longest consecutive pairings7
Position of longest consecutive pairings38
Pairings in 3prime end7
PositionCDS
2D Structure