Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGTTGTCCGTGTTGTCTTCTCT&GAAGAGACGCGGGGACCA
.((((.((((((((.(((((...&))))))))))))))))).
Details
MiRNAhsa-miR-494-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site38,56
Score0.846
Seed0
Au0.353
Energy-21.3
Binding len18
Me-6.43
Phylopstem0.5364297499999999
Phylopflank0.3651260453787879
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure