Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGTTGTCCGTGTTGTCTTCTCT&AGAGAAAGCAGCCCTGGAAAAACCA
.((((.((((.(((((.((((((&)))))).)))))..))))..)))).
Details
MiRNAhsa-miR-494-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1695,1720
Score0.923
Seed0
Au0.588
Energy-20.5
Binding len25
Me-8.519
Phylopstem4.303626333333333
Phylopflank3.3705091962500004
Longest consecutive pairings6
Position of longest consecutive pairings19
Pairings in 3prime end7
PositionCDS
2D Structure