Details of Duplex


2D Structure dot-bracket from RNAduplex"
AACATTCATTGTTGTCGGTGGGT&ACCCATGGCTTTGGTTGATTTATCTTGTGACAGCAGGAGTGC
..(((((.(((((((((((((((&)))))).....................)))))))))))))).
Details
MiRNAhsa-miR-181d-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1526,1568
Score0.846
Seed0
Au0.618
Energy-20.8
Binding len42
Me-7.271
Phylopstem3.4932307999999996
Phylopflank3.907877985
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure