Details of Duplex


2D Structure dot-bracket from RNAduplex"
GAGTGCCTTCTTTTGGAGCGTT&GTGACAGAGGACTGGTATTA
.((((((.(((((((..((...&))..)))))))..)))))).
Details
MiRNAhsa-miR-515-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site440,460
Score0.923
Seed1
Au0.603
Energy-17.6
Binding len20
Me-6.34
Phylopstem2.581164285714286
Phylopflank3.563521132499999
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end3
PositionCDS
2D Structure