Details of Duplex


2D Structure dot-bracket from RNAduplex"
CCTCTAAAGGGAAGCGCTTTCT&GGAAAGTGAACCTGAGGA
((((...(((....((((((((&))))))))..))))))).
Details
MiRNAhsa-miR-520f-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1776,1794
Score0.923
Seed0
Au0.662
Energy-16.9
Binding len18
Me-19.819
Phylopstem4.28228925
Phylopflank3.84201318125
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end8
PositionCDS
2D Structure