Details of Duplex


2D Structure dot-bracket from RNAduplex"
CTCCAGAGGGAAGTACTTTCT&GAAAGTGAACTTTCCTCAGAGA
(((..(((((((((((((((.&))))))..))))))))).))).
Details
MiRNAhsa-miR-520a-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site244,266
Score0.846
Seed0
Au0.691
Energy-20.9
Binding len22
Me-11.089
Phylopstem2.2874611
Phylopflank2.1166068312500004
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end7
PositionCDS
2D Structure