Details of Duplex


2D Structure dot-bracket from RNAduplex"
CTCTAGAGGGAAGCACTTTCTC&GAAAATTCAGAAGAAATTGATGTTAATGAAAGTGAACTTTCCTCAGAGA
((((.(((((((((((((((..&.)))))))..)))))))))))).
Details
MiRNAhsa-miR-518f-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site217,266
Score0.923
Seed0
Au0.691
Energy-24.5
Binding len23
Me-8.057
Phylopstem1.8662204117647059
Phylopflank1.74652803
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure