Details of Duplex


2D Structure dot-bracket from RNAduplex"
CCTCTACAGGGAAGCGCTTTC&GGAAGCCTCCTAGAGGA
(((((...(((.((.((((((&)))))))))))))))).
Details
MiRNAhsa-miR-520b-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site871,888
Score0.846
Seed0
Au0.559
Energy-17.5
Binding len17
Me-13.778
Phylopstem5.930315
Phylopflank4.590811965
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure