Details of Duplex


2D Structure dot-bracket from RNAduplex"
CCTCTAGATGGAAGCACTGTCT&AGATGATCATCCATTTCTTCTGACTTCTTTCAGTGCTCTTGGTTTAGAGC
.((((((((.(((((((((...&.))))))).)).)))))))).
Details
MiRNAhsa-miR-517-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1314,1364
Score0.808
Seed1
Au0.618
Energy-21.6
Binding len21
Me-5.036
Phylopstem4.790329399999999
Phylopflank3.406591047500001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure