Details of Duplex


2D Structure dot-bracket from RNAduplex"
AAAGTGCTTCTCTTTGGTGGGT&ACCTCAACCTATAGGAGAAGTATA
...(((((((((((..((((((&.))))))))))))))))).
Details
MiRNAhsa-miR-520d-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site279,303
Score1.0
Seed0
Au0.676
Energy-19.9
Binding len19
Me-7.483
Phylopstem2.840731636363636
Phylopflank2.49603790875
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure