Details of Duplex


2D Structure dot-bracket from RNAduplex"
AAAGTGCTTCTCTTTGGTGGGT&ACCTCCCAAAGAAATTGAAGATCC
...(..(((((((((((.((((&)))).)))))))....))))..).
Details
MiRNAhsa-miR-520d-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site906,930
Score0.846
Seed0
Au0.588
Energy-16.7
Binding len24
Me-12.535
Phylopstem4.541994513333333
Phylopflank4.731646825
Longest consecutive pairings7
Position of longest consecutive pairings12
Pairings in 3prime end7
PositionCDS
2D Structure