Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTCTCGAGGAAAGAAGCACTTTC&GAAAGTGAACTTTCCTCAGAGAT
.((((((((((((...(((((((&)))))))..)))))))).)))).
Details
MiRNAhsa-miR-516a-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site244,267
Score1.0
Seed1
Au0.676
Energy-23.8
Binding len23
Me-5.619
Phylopstem2.2816571153846157
Phylopflank2.2328412187499995
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end7
PositionCDS
2D Structure