Details of Duplex


2D Structure dot-bracket from RNAduplex"
AACATCACAGCAAGTCTGTGCT&AGCATGTCGGATTGGGTGTGGTGA
..(((((((.(.((((((((((&))))...)))))).).))))))).
Details
MiRNAhsa-miR-499a-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1167,1191
Score0.846
Seed1
Au0.544
Energy-19.9
Binding len24
Me-9.546
Phylopstem3.0350779999999995
Phylopflank4.0983780762499995
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure