Details of Duplex


2D Structure dot-bracket from RNAduplex"
ATGCACCTGGGCAAGGATTCTG&GCCTGGTGTATT
(((((((.((((..........&))))))))))).
Details
MiRNAhsa-miR-500a-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1485,1497
Score0.846
Seed1
Au0.618
Energy-15.8
Binding len12
Me-9.366
Phylopstem2.575607085714285
Phylopflank3.4016920200000005
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure