Details of Duplex


2D Structure dot-bracket from RNAduplex"
AATCCTTTGTCCCTGGGTGAGA&TACCTGGTGACAGAGGAC
..(((((((((.(((((((...&))))))).))))))))).
Details
MiRNAhsa-miR-501-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site434,452
Score0.923
Seed1
Au0.603
Energy-22.5
Binding len18
Me-8.304
Phylopstem2.223193777777778
Phylopflank3.5862335824999985
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure