Details of Duplex


2D Structure dot-bracket from RNAduplex"
AATCCTTTGTCCCTGGGTGAGA&AGTCTGGGTCAGAGGATG
.((((((((.(((.((.(....&).)).))).)))))))).
Details
MiRNAhsa-miR-501-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1853,1871
Score0.897
Seed1
Au0.603
Energy-18.6
Binding len18
Me-5.893
Phylopstem4.5447087250000004
Phylopflank4.003836181250001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure