Details of Duplex


2D Structure dot-bracket from RNAduplex"
AATGCACCCGGGCAAGGATTCT&AATGCTAATAAGCCTGGTGTATTA
((((((.((((((.........&.)))))))))))).
Details
MiRNAhsa-miR-501-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1474,1498
Score1.0
Seed0
Au0.632
Energy-17.1
Binding len14
Me-7.307
Phylopstem1.051027333333333
Phylopflank3.786260745
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure