Details of Duplex


2D Structure dot-bracket from RNAduplex"
GGGAGCCAGGAAGTATTGATGT&CATTTCTTCTGACTTCTTTCAGTGCTCTTGGTTTA
..((((((((.((((((((...&.)))))))))))))))).
Details
MiRNAhsa-miR-505-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1325,1360
Score0.859
Seed1
Au0.603
Energy-20.0
Binding len18
Me-7.782
Phylopstem4.328721249999999
Phylopflank3.5789315225
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure