Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGATTGGTACGTCTGTGGGTAG&TTATCTTGTGACAGCAGGAGTGCCAATA
..((((((((.(((((..((..&.)).))))).)))))))).
Details
MiRNAhsa-miR-509-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1545,1573
Score0.923
Seed1
Au0.618
Energy-18.9
Binding len19
Me-7.782
Phylopstem3.03119185
Phylopflank4.101255350000001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure