Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCAGCAAACATTTATTGTGTGC&TACAGTGAGTTGTTTGCTT
..(((((((((((((((((...&)))))))))).))))))).
Details
MiRNAhsa-miR-545-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2474,2493
Score0.846
Seed1
Au0.691
Energy-17.6
Binding len19
Me-4.957
Phylopstem4.3954125
Phylopflank3.9799822799999998
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end5
Position3UTR
2D Structure