Details of Duplex


2D Structure dot-bracket from RNAduplex"
GCTAGTCCTGACTCAGCCAGT&CTGGTGACAGAGGACTGGTA
(((((((((...(((.((((.&)))))))...))))))))).
Details
MiRNAhsa-miR-554
RefseqIDNM_004362
GeneSymbolCLGN
Binding site437,457
Score0.846
Seed1
Au0.603
Energy-22.4
Binding len20
Me-11.585
Phylopstem2.1994412666666663
Phylopflank3.838741966249999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure