Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGGTAAGCTGAACCTCTGAT&CAGAGTGGTTTACCCC
.((((((((((...(((((..&))))))))))))))).
Details
MiRNAhsa-miR-555
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2643,2659
Score0.923
Seed1
Au0.662
Energy-18.9
Binding len16
Me-9.286
Phylopstem5.013592
Phylopflank3.8683270737499997
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure