Details of Duplex


2D Structure dot-bracket from RNAduplex"
GATGAGCTCATTGTAATATGAG&TTATAGTTACAGTGAGTTG
....(((((((((((((((((.&))))).)))))))))))).
Details
MiRNAhsa-miR-556-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2467,2486
Score0.846
Seed0
Au0.721
Energy-17.1
Binding len19
Me-9.547
Phylopstem4.374144388888889
Phylopflank3.9225594399999997
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure