Details of Duplex


2D Structure dot-bracket from RNAduplex"
CTTCTTGTGCTCTAGGATTGT&AGAGCACAGGAT
..(((((((((((........&))))))))))).
Details
MiRNAhsa-miR-578
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1889,1901
Score0.923
Seed1
Au0.5
Energy-17.9
Binding len12
Me-6.782
Phylopstem3.829025090909091
Phylopflank4.5349355862500005
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure