Details of Duplex


2D Structure dot-bracket from RNAduplex"
CTTCTTGTGCTCTAGGATTGT&GGAGTACTAGAGCAAGAAGA
(((((..((((((((.(((.(&).))).))))))))))))).
Details
MiRNAhsa-miR-578
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1669,1689
Score0.923
Seed0
Au0.603
Energy-17.2
Binding len20
Me-7.615
Phylopstem4.4407232500000005
Phylopflank3.8168693287500006
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure