Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCGCGGTTTGTGCCAGATGACG&GTGGCAACGACTTGGACATCTGAGCTGTCACTGCCGAAAACAGGCCGCA
..(((((((((((((((((.((&.))..)))))).))..............))))))))).
Details
MiRNAhsa-miR-579-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site57,106
Score0.923
Seed1
Au0.529
Energy-21.3
Binding len38
Me-4.957
Phylopstem0.550711996875
Phylopflank0.6254575462500002
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure