Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTCATTTGGTATAAACCGCGATT&GCGGGACTGGTCTGAAGAGACGCGGGGACCAAGTGGC
.(((((((((.....(((((...&.)))))..))))))))).
Details
MiRNAhsa-miR-579-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site25,62
Score0.846
Seed1
Au0.382
Energy-20.0
Binding len18
Me-12.846
Phylopstem-0.10469517777777779
Phylopflank0.4113230839130435
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure