Details of Duplex


2D Structure dot-bracket from RNAduplex"
TAATGATTCATCAGACTCAGAT&TTGGGTGTGGTGAGTG
.....((((((((.((((((..&)))))).)))))))).
Details
MiRNAhsa-miR-580-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1178,1194
Score0.846
Seed0
Au0.559
Energy-17.6
Binding len16
Me-14.522
Phylopstem5.670352750000001
Phylopflank3.678029927499999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure