Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGTCTTACTCCCTCAGGCACAT&GTGAAATGCTTGAAAAAGAAGAGGAAAGTGAACCTGAGGAAAAGAGTGAAGAA
..(((((((((((((((..(((&.)))..)))))))....)))))).)).
Details
MiRNAhsa-miR-550a-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1754,1807
Score0.846
Seed1
Au0.632
Energy-19.7
Binding len27
Me-4.957
Phylopstem4.538876350000001
Phylopflank3.56430556875
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end6
PositionCDS
2D Structure