Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGCACCAGCCAGGCATTGCTCAGC&GAGGGATGTTTGGCATTGTAAAAATCAGCATGCCA
.((((...((((((((((.(((...&))).))))))))))................)))).
Details
MiRNAhsa-miR-593-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1982,2017
Score0.846
Seed0
Au0.544
Energy-23.8
Binding len35
Me-9.552
Phylopstem3.1403209599999995
Phylopflank3.6229596725000004
Longest consecutive pairings10
Position of longest consecutive pairings21
Pairings in 3prime end4
Position3UTR
2D Structure