Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGTCTAGGATTGTTGGAGGAG&CCTCCAGATGTAGACCT
.((((((......(((((((..&)))))))...)))))).
Details
MiRNAhsa-miR-601
RefseqIDNM_004362
GeneSymbolCLGN
Binding site754,771
Score0.808
Seed1
Au0.603
Energy-19.5
Binding len17
Me-15.867
Phylopstem5.677448571428571
Phylopflank4.150015793749999
Longest consecutive pairings7
Position of longest consecutive pairings10
Pairings in 3prime end6
PositionCDS
2D Structure