Details of Duplex


2D Structure dot-bracket from RNAduplex"
TAAATCCCATGGTGCCTTCTCCT&GGAGAATGGGAGGCACCTCAGATTCTTAATCCAGCATGTCGGATTG
..((((((((((((((((((((.&))))).....)))))))..................)))..))))).
Details
MiRNAhsa-miR-605-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1135,1181
Score0.923
Seed1
Au0.485
Energy-21.4
Binding len46
Me-4.957
Phylopstem2.92715329111111
Phylopflank4.703194537500002
Longest consecutive pairings7
Position of longest consecutive pairings29
Pairings in 3prime end7
PositionCDS
2D Structure