Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACTCAAAACCCTTCAGTGACTT&AGCTGCTGAAGGGC
........((((((((((.((.&)).)))))))))).
Details
MiRNAhsa-miR-616-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1512,1526
Score0.846
Seed0
Au0.559
Energy-15.9
Binding len14
Me-19.424
Phylopstem3.3563575
Phylopflank3.2229196975
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure