Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGTCATTGGAGGGTTTGAGCAG&TGCCAAACCTCCAGATGTAGACC
.(((.(((((.((((((.(((.&)))))))))))))).....))).
Details
MiRNAhsa-miR-616-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site747,770
Score0.846
Seed0
Au0.618
Energy-17.8
Binding len23
Me-10.737
Phylopstem4.507002016666667
Phylopflank4.517110454999999
Longest consecutive pairings14
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure