Details of Duplex


2D Structure dot-bracket from RNAduplex"
GACCTGGACATGTTTGTGCCCAGT&ATTGAAATCATAGAAGGGCAAGAAGAAAGTAATCAATCAAATAAGTCTGGGTCA
(((((((((.(((((((((((...&.))))).................)))))).))))))))).
Details
MiRNAhsa-miR-619-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1810,1864
Score0.846
Seed1
Au0.588
Energy-26.7
Binding len40
Me-5.18
Phylopstem4.390589785714286
Phylopflank4.5038875462500005
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure