Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGGTTTACGTTGGGAGAACT&AGTTTTCGAAGAGAAACATGCCAAACCTCCAGATGTAGACCTT
.(((((((((((.((((....&.)))).))))))))))).
Details
MiRNAhsa-miR-629-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site729,772
Score0.923
Seed1
Au0.603
Energy-21.1
Binding len18
Me-5.082
Phylopstem4.667575636363637
Phylopflank4.76130814125
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure