Details of Duplex


2D Structure dot-bracket from RNAduplex"
GTCCCTCTCCAAATGTGTCTTG&CTGGAATGAAGACACGGATGGAGAATGGGAG
.((((((((((..((((((((.&.))))))))..))))))..)))).
Details
MiRNAhsa-miR-642a-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1116,1147
Score1.0
Seed1
Au0.5
Energy-25.9
Binding len24
Me-8.429
Phylopstem3.347798633333333
Phylopflank3.8408022500000003
Longest consecutive pairings8
Position of longest consecutive pairings15
Pairings in 3prime end7
PositionCDS
2D Structure