Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACACATTTGGAGAGGGAACC&CCAAACCTCCAGATGTA
....((((((((((..((....&))....)))))))))).
Details
MiRNAhsa-miR-642a-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site749,766
Score0.846
Seed0
Au0.603
Energy-15.4
Binding len17
Me-10.515
Phylopstem4.7070416999999996
Phylopflank4.145227653749999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure