Details of Duplex


2D Structure dot-bracket from RNAduplex"
AAGCAGCTGCCTCTGAGGC&TTAATGGCAGCTGCTG
.((((((((((..(((...&)))..)))))))))).
Details
MiRNAhsa-miR-646
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1504,1520
Score0.923
Seed1
Au0.574
Energy-22.1
Binding len16
Me-8.429
Phylopstem3.7940775
Phylopflank2.9608447350000002
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure