Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGCCTGGGTCTCTGGCCTGCGCGT&TGCGCGGCCGCCGGCGGGACTGGTCTGAAGAGACGCGGGGAC
(.((((.((((((((((.(((((.&)))))))))...................)))))).)))).).
Details
MiRNAhsa-miR-661
RefseqIDNM_004362
GeneSymbolCLGN
Binding site12,54
Score0.846
Seed0
Au0.338
Energy-30.7
Binding len42
Me-6.645
Phylopstem0.2376462172413793
Phylopflank0.27077520357142865
Longest consecutive pairings9
Position of longest consecutive pairings33
Pairings in 3prime end6
Position5UTR
2D Structure