Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCCCACGTTGTGGCCCAGCAG&CTGGGCTGCAGATGGTTGGAG
(((.((.(((((((((((...&)))))))))))...)).))).
Details
MiRNAhsa-miR-662
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1434,1455
Score1.0
Seed0
Au0.603
Energy-21.5
Binding len21
Me-8.513
Phylopstem4.071488727272727
Phylopflank2.6638203700000007
Longest consecutive pairings11
Position of longest consecutive pairings10
Pairings in 3prime end5
PositionCDS
2D Structure