Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGCGGGGCGCCGCGGGACCGC&GCGGGGACCAAGTGGCAACGACTTGGACATCTGAGCTGTCACTGCCG
.(((((((((((((((..((((&))))...))..))))).....................))).))))).
Details
MiRNAhsa-miR-663a
RefseqIDNM_004362
GeneSymbolCLGN
Binding site46,93
Score0.846
Seed1
Au0.515
Energy-25.3
Binding len47
Me-3.793
Phylopstem0.502737482051282
Phylopflank0.568614985
Longest consecutive pairings5
Position of longest consecutive pairings31
Pairings in 3prime end6
Position5UTR
2D Structure