Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGCAGTGTATTGTTAGCTGGC&CATCTGAGCTGTCACTGCCG
.(((((((.....((((.((..&)).)))).....))))))).
Details
MiRNAhsa-miR-449b-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site73,93
Score1.0
Seed1
Au0.515
Energy-17.5
Binding len20
Me-13.553
Phylopstem0.40312599999999993
Phylopflank0.6238409475000001
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure