Details of Duplex


2D Structure dot-bracket from RNAduplex"
TATGTCTGCTGACCATCACCTT&GATGGTTGGAGATG
...((((.(((((((((.....&))))))))))))).
Details
MiRNAhsa-miR-654-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1444,1458
Score1.0
Seed0
Au0.574
Energy-16.6
Binding len14
Me-8.828
Phylopstem5.400441777777778
Phylopflank2.7732504500000004
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure