Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGCTCATCCATAGTTGTCACTG&GATGACATGGATGAGG
..(((((((((.((((((....&))))))))))))))).
Details
MiRNAhsa-miR-549a-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site364,380
Score0.923
Seed1
Au0.632
Energy-20.9
Binding len16
Me-8.304
Phylopstem2.4607071111111107
Phylopflank2.5040543162499995
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure